Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.68■□□□□ 0.42
Igh-VJ558P01758 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igh-VJ558P01758 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.68■□□□□ 0.42
Igh-VJ558P01758 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Gm7417-201ENSMUST00000192950 473 ntBASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-VJ558P01758 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-VJ558P01758 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Gm9870-201ENSMUST00000063874 645 ntBASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Gm9959-201ENSMUST00000068277 390 ntBASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms