Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.68■□□□□ 0.42
Igh-VJ558P01758 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igh-VJ558P01758 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.68■□□□□ 0.42
Igh-VJ558P01758 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igh-VJ558P01758 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Igh-VJ558P01758 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igh-VJ558P01758 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igh-VJ558P01758 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igh-VJ558P01758 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igh-VJ558P01758 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Gm7417-201ENSMUST00000192950 473 ntBASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Igh-VJ558P01758 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Igh-VJ558P01758 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Igh-VJ558P01758 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-VJ558P01758 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Igh-VJ558P01758 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Gm9870-201ENSMUST00000063874 645 ntBASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Gm9959-201ENSMUST00000068277 390 ntBASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.58■□□□□ 0.4
Igh-VJ558P01758 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms