Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Abcd4O89016 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.29■□□□□ 0.52
Abcd4O89016 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.29■□□□□ 0.52
Abcd4O89016 Gm45417-201ENSMUST00000209533 758 ntBASIC18.29■□□□□ 0.52
Abcd4O89016 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Abcd4O89016 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Abcd4O89016 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Abcd4O89016 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.28■□□□□ 0.52
Abcd4O89016 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcd4O89016 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Abcd4O89016 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Abcd4O89016 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Abcd4O89016 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Abcd4O89016 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.26■□□□□ 0.51
Abcd4O89016 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.26■□□□□ 0.51
Abcd4O89016 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.26■□□□□ 0.51
Abcd4O89016 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Abcd4O89016 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.26■□□□□ 0.51
Abcd4O89016 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Abcd4O89016 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Abcd4O89016 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcd4O89016 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcd4O89016 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcd4O89016 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Abcd4O89016 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Abcd4O89016 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.25■□□□□ 0.51
Abcd4O89016 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Abcd4O89016 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Abcd4O89016 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Abcd4O89016 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Abcd4O89016 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Abcd4O89016 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Abcd4O89016 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Abcd4O89016 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Abcd4O89016 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Abcd4O89016 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcd4O89016 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcd4O89016 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.23■□□□□ 0.51
Abcd4O89016 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcd4O89016 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Abcd4O89016 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcd4O89016 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.23■□□□□ 0.51
Abcd4O89016 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcd4O89016 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.23■□□□□ 0.51
Abcd4O89016 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcd4O89016 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Abcd4O89016 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.23■□□□□ 0.51
Abcd4O89016 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Abcd4O89016 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
Abcd4O89016 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Abcd4O89016 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Abcd4O89016 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Abcd4O89016 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms