Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.29□□□□□ -0.12
Sh2d1aO88890 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh2d1aO88890 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh2d1aO88890 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh2d1aO88890 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Sh2d1aO88890 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh2d1aO88890 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh2d1aO88890 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh2d1aO88890 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sh2d1aO88890 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sh2d1aO88890 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.27□□□□□ -0.13
Sh2d1aO88890 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh2d1aO88890 Iqck-206ENSMUST00000208658 2891 ntBASIC14.27□□□□□ -0.13
Sh2d1aO88890 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sh2d1aO88890 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.26□□□□□ -0.13
Sh2d1aO88890 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh2d1aO88890 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Gm15820-201ENSMUST00000201566 728 ntBASIC14.25□□□□□ -0.13
Sh2d1aO88890 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sh2d1aO88890 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.24□□□□□ -0.13
Sh2d1aO88890 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sh2d1aO88890 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.23□□□□□ -0.13
Sh2d1aO88890 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.23□□□□□ -0.13
Sh2d1aO88890 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.23□□□□□ -0.13
Sh2d1aO88890 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.23□□□□□ -0.13
Sh2d1aO88890 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.23□□□□□ -0.13
Sh2d1aO88890 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh2d1aO88890 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms