Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.79■□□□□ 0.92
ShdO88834 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.79■□□□□ 0.92
ShdO88834 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.79■□□□□ 0.92
ShdO88834 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.79■□□□□ 0.92
ShdO88834 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShdO88834 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ShdO88834 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ShdO88834 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
ShdO88834 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShdO88834 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ShdO88834 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShdO88834 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ShdO88834 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShdO88834 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ShdO88834 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ShdO88834 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ShdO88834 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ShdO88834 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ShdO88834 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.78■□□□□ 0.92
ShdO88834 Gm7143-201ENSMUST00000222811 859 ntBASIC20.78■□□□□ 0.92
ShdO88834 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShdO88834 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.77■□□□□ 0.92
ShdO88834 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ShdO88834 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShdO88834 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ShdO88834 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ShdO88834 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShdO88834 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShdO88834 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShdO88834 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ShdO88834 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.75■□□□□ 0.91
ShdO88834 Gm22238-201ENSMUST00000175222 88 ntBASIC20.75■□□□□ 0.91
ShdO88834 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShdO88834 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShdO88834 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.74■□□□□ 0.91
ShdO88834 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShdO88834 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.74■□□□□ 0.91
ShdO88834 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ShdO88834 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShdO88834 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShdO88834 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShdO88834 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShdO88834 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShdO88834 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.73■□□□□ 0.91
ShdO88834 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.73■□□□□ 0.91
ShdO88834 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ShdO88834 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShdO88834 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
ShdO88834 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShdO88834 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ShdO88834 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ShdO88834 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ShdO88834 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ShdO88834 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.72■□□□□ 0.91
ShdO88834 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ShdO88834 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ShdO88834 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ShdO88834 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.71■□□□□ 0.91
ShdO88834 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ShdO88834 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ShdO88834 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShdO88834 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ShdO88834 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShdO88834 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShdO88834 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShdO88834 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ShdO88834 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShdO88834 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ShdO88834 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ShdO88834 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShdO88834 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ShdO88834 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.69■□□□□ 0.9
ShdO88834 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms