Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcn1O88704 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hcn1O88704 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hcn1O88704 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hcn1O88704 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hcn1O88704 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.34■□□□□ 0.69
Hcn1O88704 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Hcn1O88704 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Hcn1O88704 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hcn1O88704 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.34■□□□□ 0.69
Hcn1O88704 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hcn1O88704 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hcn1O88704 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hcn1O88704 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Hcn1O88704 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.33■□□□□ 0.68
Hcn1O88704 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn1O88704 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn1O88704 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn1O88704 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hcn1O88704 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn1O88704 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Hcn1O88704 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hcn1O88704 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.31■□□□□ 0.68
Hcn1O88704 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
Hcn1O88704 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hcn1O88704 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn1O88704 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn1O88704 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hcn1O88704 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hcn1O88704 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hcn1O88704 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hcn1O88704 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hcn1O88704 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.3■□□□□ 0.68
Hcn1O88704 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hcn1O88704 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hcn1O88704 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Hcn1O88704 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Hcn1O88704 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.29■□□□□ 0.68
Hcn1O88704 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hcn1O88704 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn1O88704 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn1O88704 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn1O88704 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn1O88704 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn1O88704 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hcn1O88704 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.28■□□□□ 0.68
Hcn1O88704 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn1O88704 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn1O88704 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn1O88704 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hcn1O88704 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hcn1O88704 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.27■□□□□ 0.68
Hcn1O88704 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hcn1O88704 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Hcn1O88704 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Hcn1O88704 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.26■□□□□ 0.67
Hcn1O88704 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.26■□□□□ 0.67
Hcn1O88704 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Hcn1O88704 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn1O88704 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn1O88704 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hcn1O88704 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hcn1O88704 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.25■□□□□ 0.67
Hcn1O88704 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn1O88704 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn1O88704 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.25■□□□□ 0.67
Hcn1O88704 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms