Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC27.01■■□□□ 1.91
Ubr1O70481 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Ubr1O70481 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ubr1O70481 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC27.01■■□□□ 1.91
Ubr1O70481 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ubr1O70481 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC27■■□□□ 1.91
Ubr1O70481 Gm43060-201ENSMUST00000200621 289 ntBASIC27■■□□□ 1.91
Ubr1O70481 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC27■■□□□ 1.91
Ubr1O70481 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
Ubr1O70481 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Ubr1O70481 Gm5913-201ENSMUST00000119397 1399 ntBASIC27■■□□□ 1.91
Ubr1O70481 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ubr1O70481 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Ubr1O70481 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ubr1O70481 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ubr1O70481 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC26.99■■□□□ 1.91
Ubr1O70481 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC26.99■■□□□ 1.91
Ubr1O70481 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Ubr1O70481 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ubr1O70481 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ubr1O70481 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Ubr1O70481 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC26.98■■□□□ 1.91
Ubr1O70481 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.97■■□□□ 1.91
Ubr1O70481 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC26.97■■□□□ 1.91
Ubr1O70481 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC26.97■■□□□ 1.91
Ubr1O70481 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Ubr1O70481 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ubr1O70481 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ubr1O70481 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Ubr1O70481 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
Ubr1O70481 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ubr1O70481 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Ubr1O70481 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Ubr1O70481 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.96■■□□□ 1.91
Ubr1O70481 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ubr1O70481 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr1O70481 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.95■■□□□ 1.9
Ubr1O70481 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr1O70481 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
Ubr1O70481 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Ubr1O70481 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Ubr1O70481 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr1O70481 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr1O70481 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr1O70481 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr1O70481 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr1O70481 Gm10033-202ENSMUST00000211874 928 ntBASIC26.94■■□□□ 1.9
Ubr1O70481 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr1O70481 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Ubr1O70481 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC26.93■■□□□ 1.9
Ubr1O70481 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr1O70481 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr1O70481 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr1O70481 Gm7291-201ENSMUST00000199147 382 ntBASIC26.92■■□□□ 1.9
Ubr1O70481 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC26.92■■□□□ 1.9
Ubr1O70481 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr1O70481 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Ubr1O70481 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Ubr1O70481 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
Ubr1O70481 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ubr1O70481 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Ubr1O70481 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ubr1O70481 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ubr1O70481 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
Ubr1O70481 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Ubr1O70481 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC26.91■■□□□ 1.9
Ubr1O70481 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ubr1O70481 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ubr1O70481 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ubr1O70481 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Ubr1O70481 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Ubr1O70481 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ubr1O70481 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ubr1O70481 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
Ubr1O70481 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ubr1O70481 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Ubr1O70481 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr1O70481 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr1O70481 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr1O70481 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Ubr1O70481 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.88■■□□□ 1.89
Ubr1O70481 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr1O70481 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC26.87■■□□□ 1.89
Ubr1O70481 Gm37179-201ENSMUST00000194862 823 ntBASIC26.87■■□□□ 1.89
Ubr1O70481 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr1O70481 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.87■■□□□ 1.89
Ubr1O70481 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Ubr1O70481 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubr1O70481 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr1O70481 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr1O70481 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr1O70481 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr1O70481 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr1O70481 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC26.86■■□□□ 1.89
Ubr1O70481 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ubr1O70481 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ubr1O70481 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ubr1O70481 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ubr1O70481 Gm27405-201ENSMUST00000184201 112 ntBASIC26.85■■□□□ 1.89
Ubr1O70481 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC26.85■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms