Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx3O70137 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Alx3O70137 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx3O70137 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx3O70137 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx3O70137 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx3O70137 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx3O70137 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Alx3O70137 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.39■□□□□ 0.53
Alx3O70137 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.39■□□□□ 0.53
Alx3O70137 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Alx3O70137 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Alx3O70137 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alx3O70137 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.38■□□□□ 0.53
Alx3O70137 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx3O70137 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx3O70137 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx3O70137 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Alx3O70137 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx3O70137 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx3O70137 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Alx3O70137 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Alx3O70137 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.37■□□□□ 0.53
Alx3O70137 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.37■□□□□ 0.53
Alx3O70137 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Alx3O70137 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx3O70137 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Alx3O70137 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Alx3O70137 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx3O70137 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Alx3O70137 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.35■□□□□ 0.53
Alx3O70137 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Gm13238-201ENSMUST00000117655 780 ntBASIC18.35■□□□□ 0.53
Alx3O70137 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.35■□□□□ 0.53
Alx3O70137 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Alx3O70137 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx3O70137 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx3O70137 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx3O70137 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Alx3O70137 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.34■□□□□ 0.53
Alx3O70137 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Alx3O70137 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx3O70137 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Alx3O70137 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Alx3O70137 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alx3O70137 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alx3O70137 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Alx3O70137 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alx3O70137 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alx3O70137 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alx3O70137 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Alx3O70137 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Gm10399-202ENSMUST00000202768 748 ntBASIC18.32■□□□□ 0.52
Alx3O70137 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.32■□□□□ 0.52
Alx3O70137 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Alx3O70137 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.32■□□□□ 0.52
Alx3O70137 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Alx3O70137 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.31■□□□□ 0.52
Alx3O70137 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Alx3O70137 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms