Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb2O55203 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb2O55203 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.27■□□□□ 0.84
Ldb2O55203 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb2O55203 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.27■□□□□ 0.84
Ldb2O55203 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb2O55203 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ldb2O55203 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb2O55203 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Ldb2O55203 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb2O55203 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb2O55203 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ldb2O55203 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.26■□□□□ 0.83
Ldb2O55203 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ldb2O55203 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.26■□□□□ 0.83
Ldb2O55203 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ldb2O55203 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ldb2O55203 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ldb2O55203 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ldb2O55203 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ldb2O55203 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.25■□□□□ 0.83
Ldb2O55203 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.25■□□□□ 0.83
Ldb2O55203 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.25■□□□□ 0.83
Ldb2O55203 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ldb2O55203 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ldb2O55203 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ldb2O55203 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ldb2O55203 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.23■□□□□ 0.83
Ldb2O55203 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ldb2O55203 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ldb2O55203 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ldb2O55203 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ldb2O55203 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ldb2O55203 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ldb2O55203 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ldb2O55203 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ldb2O55203 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.22■□□□□ 0.83
Ldb2O55203 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Ldb2O55203 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ldb2O55203 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.21■□□□□ 0.83
Ldb2O55203 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ldb2O55203 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.21■□□□□ 0.83
Ldb2O55203 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ldb2O55203 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ldb2O55203 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.2■□□□□ 0.82
Ldb2O55203 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ldb2O55203 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ldb2O55203 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ldb2O55203 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Ldb2O55203 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ldb2O55203 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.19■□□□□ 0.82
Ldb2O55203 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ldb2O55203 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ldb2O55203 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Ldb2O55203 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ldb2O55203 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Ldb2O55203 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ldb2O55203 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ldb2O55203 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ldb2O55203 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ldb2O55203 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
Ldb2O55203 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ldb2O55203 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.17■□□□□ 0.82
Ldb2O55203 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.17■□□□□ 0.82
Ldb2O55203 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ldb2O55203 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ldb2O55203 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ldb2O55203 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ldb2O55203 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ldb2O55203 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ldb2O55203 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.16■□□□□ 0.82
Ldb2O55203 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ldb2O55203 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.16■□□□□ 0.82
Ldb2O55203 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ldb2O55203 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ldb2O55203 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ldb2O55203 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ldb2O55203 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ldb2O55203 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ldb2O55203 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms