Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trdmt1O55055 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.65■■□□□ 1.22
Trdmt1O55055 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trdmt1O55055 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Trdmt1O55055 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trdmt1O55055 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.64■■□□□ 1.22
Trdmt1O55055 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trdmt1O55055 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.64■■□□□ 1.22
Trdmt1O55055 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trdmt1O55055 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trdmt1O55055 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.64■■□□□ 1.21
Trdmt1O55055 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.64■■□□□ 1.21
Trdmt1O55055 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Trdmt1O55055 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.64■■□□□ 1.21
Trdmt1O55055 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.64■■□□□ 1.21
Trdmt1O55055 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.64■■□□□ 1.21
Trdmt1O55055 Gm42642-201ENSMUST00000200683 355 ntBASIC22.64■■□□□ 1.21
Trdmt1O55055 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.64■■□□□ 1.21
Trdmt1O55055 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trdmt1O55055 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trdmt1O55055 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trdmt1O55055 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trdmt1O55055 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trdmt1O55055 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.63■■□□□ 1.21
Trdmt1O55055 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trdmt1O55055 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trdmt1O55055 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trdmt1O55055 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trdmt1O55055 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.62■■□□□ 1.21
Trdmt1O55055 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trdmt1O55055 Gm27405-201ENSMUST00000184201 112 ntBASIC22.62■■□□□ 1.21
Trdmt1O55055 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.62■■□□□ 1.21
Trdmt1O55055 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.62■■□□□ 1.21
Trdmt1O55055 Gm42569-201ENSMUST00000200539 472 ntBASIC22.62■■□□□ 1.21
Trdmt1O55055 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trdmt1O55055 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trdmt1O55055 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Trdmt1O55055 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.62■■□□□ 1.21
Trdmt1O55055 Gm10849-201ENSMUST00000100397 618 ntBASIC22.61■■□□□ 1.21
Trdmt1O55055 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trdmt1O55055 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.61■■□□□ 1.21
Trdmt1O55055 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trdmt1O55055 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trdmt1O55055 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Trdmt1O55055 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trdmt1O55055 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trdmt1O55055 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trdmt1O55055 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Trdmt1O55055 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.6■■□□□ 1.21
Trdmt1O55055 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trdmt1O55055 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Trdmt1O55055 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trdmt1O55055 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trdmt1O55055 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.6■■□□□ 1.21
Trdmt1O55055 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trdmt1O55055 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trdmt1O55055 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trdmt1O55055 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trdmt1O55055 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.59■■□□□ 1.21
Trdmt1O55055 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.59■■□□□ 1.21
Trdmt1O55055 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Trdmt1O55055 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trdmt1O55055 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.59■■□□□ 1.21
Trdmt1O55055 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trdmt1O55055 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trdmt1O55055 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.58■■□□□ 1.21
Trdmt1O55055 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Trdmt1O55055 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Trdmt1O55055 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
Trdmt1O55055 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trdmt1O55055 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trdmt1O55055 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trdmt1O55055 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trdmt1O55055 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trdmt1O55055 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Trdmt1O55055 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.56■■□□□ 1.2
Trdmt1O55055 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Trdmt1O55055 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trdmt1O55055 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trdmt1O55055 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trdmt1O55055 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trdmt1O55055 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Trdmt1O55055 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Trdmt1O55055 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trdmt1O55055 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trdmt1O55055 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trdmt1O55055 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trdmt1O55055 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trdmt1O55055 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trdmt1O55055 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trdmt1O55055 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.54■■□□□ 1.2
Trdmt1O55055 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms