Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.17■□□□□ 0.5
Lsm2O35900 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm2O35900 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm2O35900 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm2O35900 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm2O35900 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm2O35900 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm2O35900 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Lsm2O35900 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Lsm2O35900 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm2O35900 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm2O35900 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.16■□□□□ 0.5
Lsm2O35900 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm2O35900 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm2O35900 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm2O35900 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm2O35900 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Lsm2O35900 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm2O35900 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lsm2O35900 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Lsm2O35900 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Lsm2O35900 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Lsm2O35900 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm2O35900 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm2O35900 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lsm2O35900 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.14■□□□□ 0.49
Lsm2O35900 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm2O35900 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm2O35900 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm2O35900 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm2O35900 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Lsm2O35900 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm2O35900 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm2O35900 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm2O35900 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.12■□□□□ 0.49
Lsm2O35900 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm2O35900 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm2O35900 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm2O35900 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm2O35900 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lsm2O35900 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm2O35900 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm2O35900 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm2O35900 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.11■□□□□ 0.49
Lsm2O35900 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm2O35900 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm2O35900 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm2O35900 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm2O35900 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.11■□□□□ 0.49
Lsm2O35900 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.11■□□□□ 0.49
Lsm2O35900 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm2O35900 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm2O35900 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Lsm2O35900 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm2O35900 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Lsm2O35900 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm2O35900 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm2O35900 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Lsm2O35900 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Lsm2O35900 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Gm11687-201ENSMUST00000118911 886 ntBASIC18.09■□□□□ 0.49
Lsm2O35900 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.09■□□□□ 0.49
Lsm2O35900 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.09■□□□□ 0.49
Lsm2O35900 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm2O35900 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm2O35900 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm2O35900 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.08■□□□□ 0.49
Lsm2O35900 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.08■□□□□ 0.49
Lsm2O35900 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm2O35900 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm2O35900 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm2O35900 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm2O35900 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm2O35900 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lsm2O35900 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lsm2O35900 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lsm2O35900 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.07■□□□□ 0.48
Lsm2O35900 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm2O35900 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm2O35900 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm2O35900 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm2O35900 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms