Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.42■□□□□ 0.54
Matn3O35701 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.42■□□□□ 0.54
Matn3O35701 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Matn3O35701 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Matn3O35701 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
Matn3O35701 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.41■□□□□ 0.54
Matn3O35701 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.41■□□□□ 0.54
Matn3O35701 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.41■□□□□ 0.54
Matn3O35701 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Matn3O35701 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Matn3O35701 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn3O35701 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.4■□□□□ 0.54
Matn3O35701 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Matn3O35701 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Matn3O35701 Gm44428-201ENSMUST00000204474 874 ntBASIC18.4■□□□□ 0.54
Matn3O35701 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.4■□□□□ 0.54
Matn3O35701 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Matn3O35701 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn3O35701 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Matn3O35701 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Matn3O35701 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Matn3O35701 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Matn3O35701 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Matn3O35701 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.38■□□□□ 0.53
Matn3O35701 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.38■□□□□ 0.53
Matn3O35701 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Matn3O35701 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Matn3O35701 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Matn3O35701 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Matn3O35701 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.36■□□□□ 0.53
Matn3O35701 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Matn3O35701 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.36■□□□□ 0.53
Matn3O35701 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Matn3O35701 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Matn3O35701 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.36■□□□□ 0.53
Matn3O35701 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Matn3O35701 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Matn3O35701 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.35■□□□□ 0.53
Matn3O35701 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.35■□□□□ 0.53
Matn3O35701 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Matn3O35701 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.34■□□□□ 0.53
Matn3O35701 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Scarna2-201ENSMUST00000157560 414 ntBASIC18.34■□□□□ 0.53
Matn3O35701 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Matn3O35701 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms