Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ptch2O35595 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptch2O35595 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptch2O35595 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ptch2O35595 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptch2O35595 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ptch2O35595 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ptch2O35595 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptch2O35595 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptch2O35595 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptch2O35595 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.87■□□□□ 0.93
Ptch2O35595 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.87■□□□□ 0.93
Ptch2O35595 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptch2O35595 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.87■□□□□ 0.93
Ptch2O35595 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptch2O35595 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptch2O35595 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptch2O35595 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptch2O35595 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
Ptch2O35595 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptch2O35595 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ptch2O35595 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptch2O35595 Gm43530-201ENSMUST00000195920 274 ntBASIC20.86■□□□□ 0.93
Ptch2O35595 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.86■□□□□ 0.93
Ptch2O35595 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptch2O35595 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptch2O35595 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptch2O35595 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptch2O35595 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ptch2O35595 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptch2O35595 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptch2O35595 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ptch2O35595 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptch2O35595 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.85■□□□□ 0.93
Ptch2O35595 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.84■□□□□ 0.93
Ptch2O35595 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ptch2O35595 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.84■□□□□ 0.93
Ptch2O35595 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptch2O35595 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptch2O35595 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptch2O35595 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ptch2O35595 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptch2O35595 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptch2O35595 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptch2O35595 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptch2O35595 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
Ptch2O35595 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ptch2O35595 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ptch2O35595 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ptch2O35595 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ptch2O35595 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptch2O35595 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.82■□□□□ 0.92
Ptch2O35595 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ptch2O35595 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptch2O35595 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.82■□□□□ 0.92
Ptch2O35595 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptch2O35595 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.81■□□□□ 0.92
Ptch2O35595 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ptch2O35595 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptch2O35595 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Ptch2O35595 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptch2O35595 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.8■□□□□ 0.92
Ptch2O35595 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptch2O35595 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptch2O35595 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptch2O35595 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptch2O35595 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptch2O35595 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ptch2O35595 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptch2O35595 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptch2O35595 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.79■□□□□ 0.92
Ptch2O35595 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptch2O35595 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptch2O35595 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptch2O35595 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ptch2O35595 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.78■□□□□ 0.92
Ptch2O35595 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptch2O35595 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.78■□□□□ 0.92
Ptch2O35595 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
Ptch2O35595 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ptch2O35595 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Ptch2O35595 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptch2O35595 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ptch2O35595 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.78■□□□□ 0.92
Ptch2O35595 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ptch2O35595 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ptch2O35595 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptch2O35595 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptch2O35595 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.77■□□□□ 0.92
Ptch2O35595 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms