Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Capn1O35350 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Capn1O35350 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Capn1O35350 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Capn1O35350 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capn1O35350 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
Capn1O35350 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Capn1O35350 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capn1O35350 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capn1O35350 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capn1O35350 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.69■□□□□ 0.58
Capn1O35350 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capn1O35350 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capn1O35350 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Capn1O35350 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Capn1O35350 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.68■□□□□ 0.58
Capn1O35350 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Capn1O35350 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Capn1O35350 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Capn1O35350 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Capn1O35350 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Capn1O35350 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capn1O35350 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Capn1O35350 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.67■□□□□ 0.58
Capn1O35350 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.67■□□□□ 0.58
Capn1O35350 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.67■□□□□ 0.58
Capn1O35350 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capn1O35350 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.67■□□□□ 0.58
Capn1O35350 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capn1O35350 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Capn1O35350 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.66■□□□□ 0.58
Capn1O35350 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capn1O35350 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capn1O35350 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capn1O35350 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capn1O35350 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capn1O35350 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Capn1O35350 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Capn1O35350 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Capn1O35350 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.66■□□□□ 0.58
Capn1O35350 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capn1O35350 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capn1O35350 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.65■□□□□ 0.58
Capn1O35350 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Capn1O35350 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Capn1O35350 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Capn1O35350 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capn1O35350 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capn1O35350 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Capn1O35350 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capn1O35350 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Capn1O35350 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.64■□□□□ 0.58
Capn1O35350 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capn1O35350 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.64■□□□□ 0.57
Capn1O35350 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Capn1O35350 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capn1O35350 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capn1O35350 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.64■□□□□ 0.57
Capn1O35350 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.64■□□□□ 0.57
Capn1O35350 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Capn1O35350 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capn1O35350 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capn1O35350 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Capn1O35350 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Capn1O35350 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capn1O35350 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capn1O35350 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capn1O35350 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capn1O35350 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.63■□□□□ 0.57
Capn1O35350 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capn1O35350 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Capn1O35350 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Capn1O35350 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capn1O35350 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Capn1O35350 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capn1O35350 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Capn1O35350 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.62■□□□□ 0.57
Capn1O35350 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capn1O35350 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.62■□□□□ 0.57
Capn1O35350 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capn1O35350 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capn1O35350 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Capn1O35350 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capn1O35350 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Capn1O35350 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.61■□□□□ 0.57
Capn1O35350 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Capn1O35350 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capn1O35350 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capn1O35350 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Capn1O35350 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capn1O35350 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capn1O35350 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Capn1O35350 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.6■□□□□ 0.57
Capn1O35350 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms