Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.69■■□□□ 1.06
Cpsf2O35218 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cpsf2O35218 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cpsf2O35218 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Cpsf2O35218 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cpsf2O35218 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Cpsf2O35218 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.68■■□□□ 1.06
Cpsf2O35218 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cpsf2O35218 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.67■■□□□ 1.06
Cpsf2O35218 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cpsf2O35218 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf2O35218 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Cpsf2O35218 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf2O35218 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf2O35218 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf2O35218 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf2O35218 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf2O35218 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf2O35218 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf2O35218 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf2O35218 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf2O35218 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf2O35218 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cpsf2O35218 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cpsf2O35218 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Cpsf2O35218 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpsf2O35218 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpsf2O35218 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpsf2O35218 Gm5921-201ENSMUST00000075898 882 ntBASIC21.64■■□□□ 1.05
Cpsf2O35218 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.64■■□□□ 1.05
Cpsf2O35218 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpsf2O35218 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpsf2O35218 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf2O35218 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.63■■□□□ 1.05
Cpsf2O35218 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf2O35218 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.63■■□□□ 1.05
Cpsf2O35218 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf2O35218 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf2O35218 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf2O35218 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf2O35218 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.62■■□□□ 1.05
Cpsf2O35218 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf2O35218 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf2O35218 Gm43566-201ENSMUST00000196851 808 ntBASIC21.62■■□□□ 1.05
Cpsf2O35218 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.62■■□□□ 1.05
Cpsf2O35218 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cpsf2O35218 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cpsf2O35218 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf2O35218 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf2O35218 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf2O35218 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf2O35218 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.61■■□□□ 1.05
Cpsf2O35218 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cpsf2O35218 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf2O35218 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf2O35218 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf2O35218 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cpsf2O35218 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cpsf2O35218 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cpsf2O35218 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.59■■□□□ 1.05
Cpsf2O35218 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf2O35218 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf2O35218 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf2O35218 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Cpsf2O35218 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf2O35218 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf2O35218 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.58■■□□□ 1.05
Cpsf2O35218 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf2O35218 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf2O35218 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.58■■□□□ 1.05
Cpsf2O35218 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Cpsf2O35218 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf2O35218 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Cpsf2O35218 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cpsf2O35218 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf2O35218 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms