Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cx3cl1O35188 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.02■□□□□ 0.64
Cx3cl1O35188 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Cx3cl1O35188 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cx3cl1O35188 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Cx3cl1O35188 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.01■□□□□ 0.63
Cx3cl1O35188 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.01■□□□□ 0.63
Cx3cl1O35188 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cx3cl1O35188 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Cx3cl1O35188 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cx3cl1O35188 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cx3cl1O35188 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cx3cl1O35188 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cx3cl1O35188 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19■□□□□ 0.63
Cx3cl1O35188 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19■□□□□ 0.63
Cx3cl1O35188 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cx3cl1O35188 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cx3cl1O35188 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cx3cl1O35188 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cx3cl1O35188 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cx3cl1O35188 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Cx3cl1O35188 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.98■□□□□ 0.63
Cx3cl1O35188 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.98■□□□□ 0.63
Cx3cl1O35188 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.97■□□□□ 0.63
Cx3cl1O35188 Golgb1-201ENSMUST00000023534 498 ntBASIC18.97■□□□□ 0.63
Cx3cl1O35188 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cx3cl1O35188 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cx3cl1O35188 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.96■□□□□ 0.63
Cx3cl1O35188 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Gm13241-201ENSMUST00000094493 780 ntBASIC18.96■□□□□ 0.63
Cx3cl1O35188 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cx3cl1O35188 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cx3cl1O35188 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Cx3cl1O35188 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Cx3cl1O35188 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cx3cl1O35188 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cx3cl1O35188 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cx3cl1O35188 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms