Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sh2b3O09039 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.03■□□□□ 0.48
Sh2b3O09039 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2b3O09039 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.03■□□□□ 0.48
Sh2b3O09039 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2b3O09039 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.03■□□□□ 0.48
Sh2b3O09039 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2b3O09039 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2b3O09039 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2b3O09039 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh2b3O09039 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2b3O09039 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2b3O09039 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2b3O09039 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.02■□□□□ 0.48
Sh2b3O09039 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
Sh2b3O09039 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2b3O09039 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh2b3O09039 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Sh2b3O09039 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.02■□□□□ 0.47
Sh2b3O09039 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.01■□□□□ 0.47
Sh2b3O09039 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2b3O09039 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.01■□□□□ 0.47
Sh2b3O09039 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2b3O09039 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2b3O09039 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2b3O09039 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.01■□□□□ 0.47
Sh2b3O09039 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2b3O09039 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Sh2b3O09039 Serp2-204ENSMUST00000228055 705 ntBASIC18.01■□□□□ 0.47
Sh2b3O09039 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Sh2b3O09039 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh2b3O09039 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sh2b3O09039 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2b3O09039 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2b3O09039 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2b3O09039 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh2b3O09039 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2b3O09039 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh2b3O09039 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2b3O09039 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh2b3O09039 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Sh2b3O09039 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.99■□□□□ 0.47
Sh2b3O09039 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sh2b3O09039 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh2b3O09039 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.98■□□□□ 0.47
Sh2b3O09039 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh2b3O09039 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.97■□□□□ 0.47
Sh2b3O09039 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Sh2b3O09039 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Sh2b3O09039 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh2b3O09039 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sh2b3O09039 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sh2b3O09039 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.96■□□□□ 0.47
Sh2b3O09039 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Sh2b3O09039 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sh2b3O09039 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sh2b3O09039 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh2b3O09039 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh2b3O09039 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh2b3O09039 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Sh2b3O09039 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh2b3O09039 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sh2b3O09039 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms