Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3aO08665 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.56■□□□□ 0.88
Sema3aO08665 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3aO08665 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3aO08665 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sema3aO08665 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.55■□□□□ 0.88
Sema3aO08665 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sema3aO08665 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sema3aO08665 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Sema3aO08665 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3aO08665 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.54■□□□□ 0.88
Sema3aO08665 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.54■□□□□ 0.88
Sema3aO08665 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sema3aO08665 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.54■□□□□ 0.88
Sema3aO08665 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3aO08665 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sema3aO08665 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Sema3aO08665 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sema3aO08665 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3aO08665 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3aO08665 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3aO08665 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3aO08665 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sema3aO08665 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Sema3aO08665 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3aO08665 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.52■□□□□ 0.88
Sema3aO08665 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Sema3aO08665 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3aO08665 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3aO08665 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3aO08665 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3aO08665 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sema3aO08665 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sema3aO08665 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Sema3aO08665 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sema3aO08665 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 Gm12922-201ENSMUST00000120626 809 ntBASIC20.51■□□□□ 0.87
Sema3aO08665 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Sema3aO08665 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sema3aO08665 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.5■□□□□ 0.87
Sema3aO08665 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sema3aO08665 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.5■□□□□ 0.87
Sema3aO08665 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3aO08665 Gm43530-201ENSMUST00000195920 274 ntBASIC20.5■□□□□ 0.87
Sema3aO08665 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3aO08665 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3aO08665 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sema3aO08665 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3aO08665 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3aO08665 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3aO08665 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.49■□□□□ 0.87
Sema3aO08665 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3aO08665 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3aO08665 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Sema3aO08665 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sema3aO08665 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.48■□□□□ 0.87
Sema3aO08665 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sema3aO08665 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.48■□□□□ 0.87
Sema3aO08665 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.48■□□□□ 0.87
Sema3aO08665 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sema3aO08665 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sema3aO08665 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.47■□□□□ 0.87
Sema3aO08665 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.47■□□□□ 0.87
Sema3aO08665 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.47■□□□□ 0.87
Sema3aO08665 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sema3aO08665 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Sema3aO08665 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Sema3aO08665 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3aO08665 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3aO08665 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3aO08665 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.46■□□□□ 0.87
Sema3aO08665 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3aO08665 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3aO08665 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sema3aO08665 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.45■□□□□ 0.86
Sema3aO08665 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3aO08665 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3aO08665 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms