Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sh3yl1O08641 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3yl1O08641 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3yl1O08641 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3yl1O08641 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3yl1O08641 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sh3yl1O08641 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sh3yl1O08641 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sh3yl1O08641 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3yl1O08641 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3yl1O08641 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3yl1O08641 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sh3yl1O08641 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3yl1O08641 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3yl1O08641 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.26■□□□□ 0.67
Sh3yl1O08641 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3yl1O08641 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sh3yl1O08641 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3yl1O08641 Golph3-202ENSMUST00000226517 2359 ntBASIC19.25■□□□□ 0.67
Sh3yl1O08641 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3yl1O08641 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3yl1O08641 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sh3yl1O08641 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Sh3yl1O08641 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sh3yl1O08641 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3yl1O08641 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3yl1O08641 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3yl1O08641 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3yl1O08641 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3yl1O08641 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3yl1O08641 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3yl1O08641 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3yl1O08641 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.23■□□□□ 0.67
Sh3yl1O08641 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.23■□□□□ 0.67
Sh3yl1O08641 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3yl1O08641 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.23■□□□□ 0.67
Sh3yl1O08641 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3yl1O08641 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3yl1O08641 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3yl1O08641 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3yl1O08641 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3yl1O08641 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3yl1O08641 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3yl1O08641 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3yl1O08641 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3yl1O08641 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3yl1O08641 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3yl1O08641 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3yl1O08641 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3yl1O08641 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3yl1O08641 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.21■□□□□ 0.67
Sh3yl1O08641 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3yl1O08641 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3yl1O08641 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sh3yl1O08641 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
Sh3yl1O08641 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sh3yl1O08641 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sh3yl1O08641 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms