Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Raet1aO08602 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Raet1aO08602 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Raet1aO08602 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Raet1aO08602 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Raet1aO08602 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1aO08602 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1aO08602 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1aO08602 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1aO08602 Etf1-202ENSMUST00000180351 108 ntBASIC18.01■□□□□ 0.47
Raet1aO08602 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.01■□□□□ 0.47
Raet1aO08602 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1aO08602 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Raet1aO08602 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1aO08602 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Raet1aO08602 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.01■□□□□ 0.47
Raet1aO08602 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Raet1aO08602 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.01■□□□□ 0.47
Raet1aO08602 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1aO08602 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18■□□□□ 0.47
Raet1aO08602 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1aO08602 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1aO08602 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Raet1aO08602 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18■□□□□ 0.47
Raet1aO08602 Gm9959-201ENSMUST00000068277 390 ntBASIC18■□□□□ 0.47
Raet1aO08602 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Raet1aO08602 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Raet1aO08602 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Raet1aO08602 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1aO08602 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Raet1aO08602 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1aO08602 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1aO08602 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1aO08602 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.99■□□□□ 0.47
Raet1aO08602 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.99■□□□□ 0.47
Raet1aO08602 Gm7143-201ENSMUST00000222811 859 ntBASIC17.99■□□□□ 0.47
Raet1aO08602 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Raet1aO08602 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1aO08602 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Raet1aO08602 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1aO08602 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1aO08602 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.98■□□□□ 0.47
Raet1aO08602 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Raet1aO08602 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Raet1aO08602 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Raet1aO08602 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Raet1aO08602 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Raet1aO08602 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Raet1aO08602 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1aO08602 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1aO08602 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Raet1aO08602 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1aO08602 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1aO08602 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1aO08602 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Raet1aO08602 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.96■□□□□ 0.47
Raet1aO08602 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1aO08602 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.95■□□□□ 0.46
Raet1aO08602 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1aO08602 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.95■□□□□ 0.46
Raet1aO08602 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1aO08602 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1aO08602 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Raet1aO08602 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1aO08602 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Raet1aO08602 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1aO08602 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1aO08602 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1aO08602 Notumos-201ENSMUST00000151998 2659 ntBASIC17.94■□□□□ 0.46
Raet1aO08602 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.94■□□□□ 0.46
Raet1aO08602 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1aO08602 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1aO08602 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1aO08602 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Raet1aO08602 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Raet1aO08602 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Raet1aO08602 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.93■□□□□ 0.46
Raet1aO08602 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Raet1aO08602 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.93■□□□□ 0.46
Raet1aO08602 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms