Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgo2bJ3QMK1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgo2bJ3QMK1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgo2bJ3QMK1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgo2bJ3QMK1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Sgo2bJ3QMK1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sgo2bJ3QMK1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sgo2bJ3QMK1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sgo2bJ3QMK1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sgo2bJ3QMK1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sgo2bJ3QMK1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sgo2bJ3QMK1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sgo2bJ3QMK1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 Gm7143-201ENSMUST00000222811 859 ntBASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sgo2bJ3QMK1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sgo2bJ3QMK1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sgo2bJ3QMK1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sgo2bJ3QMK1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sgo2bJ3QMK1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sgo2bJ3QMK1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sgo2bJ3QMK1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms