Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pcf11G3X9Z4 Smad6-203ENSMUST00000179458 273 ntBASIC31.46■■■□□ 2.63
Pcf11G3X9Z4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pcf11G3X9Z4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC31.45■■■□□ 2.63
Pcf11G3X9Z4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pcf11G3X9Z4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Pcf11G3X9Z4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Pcf11G3X9Z4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Pcf11G3X9Z4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pcf11G3X9Z4 Gm5874-201ENSMUST00000096101 508 ntBASIC31.44■■■□□ 2.62
Pcf11G3X9Z4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Pcf11G3X9Z4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Pcf11G3X9Z4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC31.44■■■□□ 2.62
Pcf11G3X9Z4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 AC164629.5-201ENSMUST00000220387 632 ntBASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Gm44949-201ENSMUST00000206423 1450 ntBASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pcf11G3X9Z4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Pcf11G3X9Z4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Pcf11G3X9Z4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Pcf11G3X9Z4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Pcf11G3X9Z4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Pcf11G3X9Z4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Pcf11G3X9Z4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcf11G3X9Z4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcf11G3X9Z4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcf11G3X9Z4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcf11G3X9Z4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcf11G3X9Z4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcf11G3X9Z4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcf11G3X9Z4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Pcf11G3X9Z4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC31.39■■■□□ 2.62
Pcf11G3X9Z4 Gm26766-202ENSMUST00000227544 2347 ntBASIC31.39■■■□□ 2.62
Pcf11G3X9Z4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pcf11G3X9Z4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Pcf11G3X9Z4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC31.38■■■□□ 2.61
Pcf11G3X9Z4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC31.38■■■□□ 2.61
Pcf11G3X9Z4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pcf11G3X9Z4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC31.38■■■□□ 2.61
Pcf11G3X9Z4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Pcf11G3X9Z4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Pcf11G3X9Z4 Gm10129-202ENSMUST00000193100 1316 ntBASIC31.37■■■□□ 2.61
Pcf11G3X9Z4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC31.37■■■□□ 2.61
Pcf11G3X9Z4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
Pcf11G3X9Z4 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
Pcf11G3X9Z4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Pcf11G3X9Z4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Gm10849-201ENSMUST00000100397 618 ntBASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Pcf11G3X9Z4 Gm43060-201ENSMUST00000200621 289 ntBASIC31.35■■■□□ 2.61
Pcf11G3X9Z4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC31.35■■■□□ 2.61
Pcf11G3X9Z4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pcf11G3X9Z4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Pcf11G3X9Z4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
Pcf11G3X9Z4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Pcf11G3X9Z4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pcf11G3X9Z4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pcf11G3X9Z4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pcf11G3X9Z4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC31.33■■■□□ 2.61
Pcf11G3X9Z4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pcf11G3X9Z4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC31.33■■■□□ 2.61
Pcf11G3X9Z4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pcf11G3X9Z4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pcf11G3X9Z4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Pcf11G3X9Z4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Pcf11G3X9Z4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Pcf11G3X9Z4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Pcf11G3X9Z4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Pcf11G3X9Z4 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Pcf11G3X9Z4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 AC099934.2-201ENSMUST00000196389 70 ntBASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 AC156953.1-201ENSMUST00000196953 70 ntBASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 AC157822.2-201ENSMUST00000200291 70 ntBASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Gm10493-201ENSMUST00000097270 612 ntBASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Gm29257-201ENSMUST00000186115 639 ntBASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Pcf11G3X9Z4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Pcf11G3X9Z4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Pcf11G3X9Z4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms