Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdh9F8VPK8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh9F8VPK8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Pcdh9F8VPK8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh9F8VPK8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Pcdh9F8VPK8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdh9F8VPK8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh9F8VPK8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdh9F8VPK8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Pcdh9F8VPK8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdh9F8VPK8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.88■□□□□ 0.93
Pcdh9F8VPK8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pcdh9F8VPK8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdh9F8VPK8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh9F8VPK8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh9F8VPK8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdh9F8VPK8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh9F8VPK8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh9F8VPK8 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.87■□□□□ 0.93
Pcdh9F8VPK8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdh9F8VPK8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdh9F8VPK8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdh9F8VPK8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdh9F8VPK8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh9F8VPK8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh9F8VPK8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh9F8VPK8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh9F8VPK8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh9F8VPK8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdh9F8VPK8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh9F8VPK8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh9F8VPK8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdh9F8VPK8 Gm10399-202ENSMUST00000202768 748 ntBASIC20.83■□□□□ 0.93
Pcdh9F8VPK8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdh9F8VPK8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.83■□□□□ 0.92
Pcdh9F8VPK8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Pcdh9F8VPK8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdh9F8VPK8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdh9F8VPK8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pcdh9F8VPK8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh9F8VPK8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdh9F8VPK8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh9F8VPK8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms