Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc188F6WEU2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Ccdc188F6WEU2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc188F6WEU2 Gm13148-201ENSMUST00000118892 745 ntBASIC21.01■□□□□ 0.95
Ccdc188F6WEU2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc188F6WEU2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc188F6WEU2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc188F6WEU2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Ccdc188F6WEU2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Ccdc188F6WEU2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc188F6WEU2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc188F6WEU2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc188F6WEU2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21■□□□□ 0.95
Ccdc188F6WEU2 Gm5408-201ENSMUST00000197998 747 ntBASIC21■□□□□ 0.95
Ccdc188F6WEU2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21■□□□□ 0.95
Ccdc188F6WEU2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc188F6WEU2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccdc188F6WEU2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc188F6WEU2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Gm37856-201ENSMUST00000191634 999 ntBASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc188F6WEU2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc188F6WEU2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.97■□□□□ 0.95
Ccdc188F6WEU2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc188F6WEU2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc188F6WEU2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc188F6WEU2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccdc188F6WEU2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.95■□□□□ 0.94
Ccdc188F6WEU2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Ccdc188F6WEU2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc188F6WEU2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ccdc188F6WEU2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc188F6WEU2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccdc188F6WEU2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc188F6WEU2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc188F6WEU2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc188F6WEU2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc188F6WEU2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc188F6WEU2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms