Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atf6F6VAN0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atf6F6VAN0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atf6F6VAN0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6F6VAN0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6F6VAN0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6F6VAN0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6F6VAN0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6F6VAN0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atf6F6VAN0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atf6F6VAN0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.84■□□□□ 0.93
Atf6F6VAN0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atf6F6VAN0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atf6F6VAN0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atf6F6VAN0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atf6F6VAN0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atf6F6VAN0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atf6F6VAN0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atf6F6VAN0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Etf1-202ENSMUST00000180351 108 ntBASIC20.82■□□□□ 0.92
Atf6F6VAN0 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.82■□□□□ 0.92
Atf6F6VAN0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atf6F6VAN0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atf6F6VAN0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atf6F6VAN0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atf6F6VAN0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.81■□□□□ 0.92
Atf6F6VAN0 Gm7417-201ENSMUST00000192950 473 ntBASIC20.81■□□□□ 0.92
Atf6F6VAN0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atf6F6VAN0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Atf6F6VAN0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Atf6F6VAN0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Atf6F6VAN0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atf6F6VAN0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Gm9959-201ENSMUST00000068277 390 ntBASIC20.79■□□□□ 0.92
Atf6F6VAN0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atf6F6VAN0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atf6F6VAN0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.78■□□□□ 0.92
Atf6F6VAN0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atf6F6VAN0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atf6F6VAN0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Atf6F6VAN0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms