Protein–RNA interactions for Protein: F2Z478

Gm11238, Predicted gene 11238, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11238F2Z478 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm11238F2Z478 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm11238F2Z478 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Gm11238F2Z478 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Gm11238F2Z478 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.42■■□□□ 1.02
Gm11238F2Z478 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
Gm11238F2Z478 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm11238F2Z478 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Gm11238F2Z478 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm11238F2Z478 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.42■■□□□ 1.02
Gm11238F2Z478 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm11238F2Z478 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm11238F2Z478 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gm11238F2Z478 Gm10493-201ENSMUST00000097270 612 ntBASIC21.41■■□□□ 1.02
Gm11238F2Z478 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Gm11238F2Z478 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gm11238F2Z478 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm11238F2Z478 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.38■■□□□ 1.01
Gm11238F2Z478 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm11238F2Z478 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11238F2Z478 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gm11238F2Z478 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gm11238F2Z478 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11238F2Z478 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gm11238F2Z478 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11238F2Z478 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11238F2Z478 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11238F2Z478 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11238F2Z478 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Gm11238F2Z478 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.35■■□□□ 1.01
Gm11238F2Z478 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.34■■□□□ 1.01
Gm11238F2Z478 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.34■■□□□ 1.01
Gm11238F2Z478 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm11238F2Z478 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.34■■□□□ 1.01
Gm11238F2Z478 Gm40848-201ENSMUST00000221998 324 ntBASIC21.34■■□□□ 1.01
Gm11238F2Z478 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gm11238F2Z478 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11238F2Z478 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11238F2Z478 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11238F2Z478 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11238F2Z478 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Gm11238F2Z478 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm11238F2Z478 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Gm11238F2Z478 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.33■■□□□ 1
Gm11238F2Z478 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Gm11238F2Z478 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Gm11238F2Z478 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm11238F2Z478 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Gm11238F2Z478 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11238F2Z478 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11238F2Z478 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gm11238F2Z478 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11238F2Z478 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11238F2Z478 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gm11238F2Z478 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gm11238F2Z478 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.32■■□□□ 1
Gm11238F2Z478 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.32■■□□□ 1
Gm11238F2Z478 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.32■■□□□ 1
Gm11238F2Z478 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm11238F2Z478 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms