Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpsf4lE9Q2N0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4lE9Q2N0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4lE9Q2N0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.23■□□□□ 0.35
Cpsf4lE9Q2N0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4lE9Q2N0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpsf4lE9Q2N0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cpsf4lE9Q2N0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpsf4lE9Q2N0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpsf4lE9Q2N0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpsf4lE9Q2N0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Gm43530-201ENSMUST00000195920 274 ntBASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4lE9Q2N0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms