Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mmp27D3YV89 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Mmp27D3YV89 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp27D3YV89 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp27D3YV89 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mmp27D3YV89 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mmp27D3YV89 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mmp27D3YV89 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17■□□□□ 0.31
Mmp27D3YV89 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp27D3YV89 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp27D3YV89 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Mmp27D3YV89 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mmp27D3YV89 Gm45444-201ENSMUST00000211394 898 ntBASIC17■□□□□ 0.31
Mmp27D3YV89 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp27D3YV89 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp27D3YV89 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp27D3YV89 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17■□□□□ 0.31
Mmp27D3YV89 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp27D3YV89 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Mmp27D3YV89 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp27D3YV89 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp27D3YV89 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
Mmp27D3YV89 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp27D3YV89 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.99■□□□□ 0.31
Mmp27D3YV89 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp27D3YV89 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp27D3YV89 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mmp27D3YV89 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp27D3YV89 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Mmp27D3YV89 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Gm43566-201ENSMUST00000196851 808 ntBASIC16.97■□□□□ 0.31
Mmp27D3YV89 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.97■□□□□ 0.31
Mmp27D3YV89 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Gm5812-201ENSMUST00000061073 957 ntBASIC16.96■□□□□ 0.31
Mmp27D3YV89 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Mmp27D3YV89 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.96■□□□□ 0.3
Mmp27D3YV89 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp27D3YV89 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp27D3YV89 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Mmp27D3YV89 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp27D3YV89 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp27D3YV89 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp27D3YV89 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.95■□□□□ 0.3
Mmp27D3YV89 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp27D3YV89 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms