Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd6A3KFM7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Trmt13-210ENSMUST00000198454 880 ntBASIC16.9■□□□□ 0.3
Chd6A3KFM7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Chd6A3KFM7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.89■□□□□ 0.29
Chd6A3KFM7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Chd6A3KFM7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.89■□□□□ 0.29
Chd6A3KFM7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd6A3KFM7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd6A3KFM7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd6A3KFM7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd6A3KFM7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd6A3KFM7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.89■□□□□ 0.29
Chd6A3KFM7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd6A3KFM7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd6A3KFM7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd6A3KFM7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.87■□□□□ 0.29
Chd6A3KFM7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd6A3KFM7 Gm11643-201ENSMUST00000119578 864 ntBASIC16.87■□□□□ 0.29
Chd6A3KFM7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.87■□□□□ 0.29
Chd6A3KFM7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.87■□□□□ 0.29
Chd6A3KFM7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chd6A3KFM7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd6A3KFM7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chd6A3KFM7 Gm25925-201ENSMUST00000158314 306 ntBASIC16.87■□□□□ 0.29
Chd6A3KFM7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chd6A3KFM7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd6A3KFM7 Gm13234-201ENSMUST00000120010 747 ntBASIC16.86■□□□□ 0.29
Chd6A3KFM7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd6A3KFM7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd6A3KFM7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Chd6A3KFM7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
Chd6A3KFM7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd6A3KFM7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd6A3KFM7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
Chd6A3KFM7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.83■□□□□ 0.29
Chd6A3KFM7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd6A3KFM7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.83■□□□□ 0.28
Chd6A3KFM7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd6A3KFM7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.83■□□□□ 0.28
Chd6A3KFM7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Reep4-203ENSMUST00000226563 1444 ntBASIC16.82■□□□□ 0.28
Chd6A3KFM7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd6A3KFM7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd6A3KFM7 Gm7514-201ENSMUST00000209475 934 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms