Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ubr4A2AN08 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Ubr4A2AN08 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ubr4A2AN08 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC11.06□□□□□ -0.64
Ubr4A2AN08 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubr4A2AN08 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.05□□□□□ -0.64
Ubr4A2AN08 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.05□□□□□ -0.64
Ubr4A2AN08 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.05□□□□□ -0.64
Ubr4A2AN08 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.05□□□□□ -0.64
Ubr4A2AN08 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubr4A2AN08 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubr4A2AN08 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ubr4A2AN08 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ubr4A2AN08 AC158990.1-201ENSMUST00000221450 2016 ntBASIC11.05□□□□□ -0.64
Ubr4A2AN08 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Gm6576-201ENSMUST00000169678 883 ntBASIC11.04□□□□□ -0.64
Ubr4A2AN08 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.04□□□□□ -0.64
Ubr4A2AN08 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.04□□□□□ -0.64
Ubr4A2AN08 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Kdm3b-204ENSMUST00000224715 2032 ntBASIC11.04□□□□□ -0.64
Ubr4A2AN08 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC11.04□□□□□ -0.64
Ubr4A2AN08 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Zxda-201ENSMUST00000117281 2621 ntBASIC11.03□□□□□ -0.64
Ubr4A2AN08 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ubr4A2AN08 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ubr4A2AN08 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Ubr4A2AN08 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.02□□□□□ -0.64
Ubr4A2AN08 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ubr4A2AN08 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ubr4A2AN08 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.02□□□□□ -0.65
Ubr4A2AN08 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubr4A2AN08 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ubr4A2AN08 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ubr4A2AN08 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ubr4A2AN08 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ubr4A2AN08 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ubr4A2AN08 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11□□□□□ -0.65
Ubr4A2AN08 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ubr4A2AN08 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC11□□□□□ -0.65
Ubr4A2AN08 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ubr4A2AN08 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11□□□□□ -0.65
Ubr4A2AN08 AC122769.4-201ENSMUST00000228166 901 ntBASIC11□□□□□ -0.65
Ubr4A2AN08 Gm9987-201ENSMUST00000069768 567 ntBASIC11□□□□□ -0.65
Ubr4A2AN08 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ubr4A2AN08 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ubr4A2AN08 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Ubr4A2AN08 Gm6420-201ENSMUST00000193885 723 ntBASIC10.99□□□□□ -0.65
Ubr4A2AN08 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC10.99□□□□□ -0.65
Ubr4A2AN08 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ubr4A2AN08 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ubr4A2AN08 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC10.99□□□□□ -0.65
Ubr4A2AN08 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Ubr4A2AN08 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ubr4A2AN08 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ubr4A2AN08 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ubr4A2AN08 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ubr4A2AN08 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ubr4A2AN08 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ubr4A2AN08 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ubr4A2AN08 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms