Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Gm3880A0A1B0GSB3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Gm3880A0A1B0GSB3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Gm3880A0A1B0GSB3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Gm3880A0A1B0GSB3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Gm3880A0A1B0GSB3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Gm3880A0A1B0GSB3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm3880A0A1B0GSB3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Gm3880A0A1B0GSB3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC10.12□□□□□ -0.79
Gm3880A0A1B0GSB3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Gm3880A0A1B0GSB3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms