Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav13n-1A0A0G2JEU8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.63□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gm21956-201ENSMUST00000179946 522 ntBASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Golgb1-201ENSMUST00000023534 498 ntBASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.58□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav13n-1A0A0G2JEU8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav13n-1A0A0G2JEU8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms