Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Gm9806-201ENSMUST00000051080 552 ntBASIC15.23■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav3n-3A0A0G2JEM0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav3n-3A0A0G2JEM0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav3n-3A0A0G2JEM0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav3n-3A0A0G2JEM0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms