Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 AC117769.4-201ENSMUST00000225679 685 ntBASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gm45364-201ENSMUST00000210883 159 ntBASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav4-3A0A0B4J1K1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gm44428-201ENSMUST00000204474 874 ntBASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav4-3A0A0B4J1K1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav4-3A0A0B4J1K1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav4-3A0A0B4J1K1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav4-3A0A0B4J1K1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav4-3A0A0B4J1K1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav4-3A0A0B4J1K1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms