Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv5-43A0A0B4J1J2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Gm12251-201ENSMUST00000117893 792 ntBASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.91■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.91■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.91■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.9■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Igkv5-43A0A0B4J1J2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.89■□□□□ 0.94
Igkv5-43A0A0B4J1J2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Serp2-204ENSMUST00000228055 705 ntBASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv5-43A0A0B4J1J2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Igkv5-43A0A0B4J1J2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms