Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BC053393A0A0B4J1F6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.22■□□□□ 0.19
BC053393A0A0B4J1F6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BC053393A0A0B4J1F6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.22■□□□□ 0.19
BC053393A0A0B4J1F6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
BC053393A0A0B4J1F6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
BC053393A0A0B4J1F6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
BC053393A0A0B4J1F6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
BC053393A0A0B4J1F6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BC053393A0A0B4J1F6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.19■□□□□ 0.18
BC053393A0A0B4J1F6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BC053393A0A0B4J1F6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BC053393A0A0B4J1F6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BC053393A0A0B4J1F6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BC053393A0A0B4J1F6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
BC053393A0A0B4J1F6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
BC053393A0A0B4J1F6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms