Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-47A0A0A6YY41 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ighv1-47A0A0A6YY41 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ighv1-47A0A0A6YY41 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-47A0A0A6YY41 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-47A0A0A6YY41 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-47A0A0A6YY41 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ighv1-47A0A0A6YY41 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Iqck-206ENSMUST00000208658 2891 ntBASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-47A0A0A6YY41 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ighv1-47A0A0A6YY41 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-47A0A0A6YY41 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-47A0A0A6YY41 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-47A0A0A6YY41 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-47A0A0A6YY41 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ighv1-47A0A0A6YY41 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-47A0A0A6YY41 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-47A0A0A6YY41 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-47A0A0A6YY41 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-47A0A0A6YY41 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-47A0A0A6YY41 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.76■□□□□ 0.27
Ighv1-47A0A0A6YY41 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.76■□□□□ 0.27
Ighv1-47A0A0A6YY41 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-47A0A0A6YY41 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv1-47A0A0A6YY41 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv1-47A0A0A6YY41 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ighv1-47A0A0A6YY41 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Golph3-202ENSMUST00000226517 2359 ntBASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Gm10399-202ENSMUST00000202768 748 ntBASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv1-47A0A0A6YY41 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ighv1-47A0A0A6YY41 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv1-47A0A0A6YY41 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ighv1-47A0A0A6YY41 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ighv1-47A0A0A6YY41 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.7■□□□□ 0.26
Ighv1-47A0A0A6YY41 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms