Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Gm13238-201ENSMUST00000117655 780 ntBASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-9A0A0A6YW37 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-9A0A0A6YW37 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-9A0A0A6YW37 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-9A0A0A6YW37 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-9A0A0A6YW37 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.27■□□□□ 0.03
Ighv1-9A0A0A6YW37 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-9A0A0A6YW37 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Gm10399-202ENSMUST00000202768 748 ntBASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-9A0A0A6YW37 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Gm10232-201ENSMUST00000089221 720 ntBASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-9A0A0A6YW37 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Ighv1-9A0A0A6YW37 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-9A0A0A6YW37 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms