Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28557A0A087WQQ0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm28557A0A087WQQ0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Gm28557A0A087WQQ0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28557A0A087WQQ0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28557A0A087WQQ0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28557A0A087WQQ0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gm28557A0A087WQQ0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28557A0A087WQQ0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm28557A0A087WQQ0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.27■□□□□ 0.52
Gm28557A0A087WQQ0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm28557A0A087WQQ0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm28557A0A087WQQ0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28557A0A087WQQ0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Gm28557A0A087WQQ0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28557A0A087WQQ0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28557A0A087WQQ0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Gm28557A0A087WQQ0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.24■□□□□ 0.51
Gm28557A0A087WQQ0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Gm28557A0A087WQQ0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm28557A0A087WQQ0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Gm28557A0A087WQQ0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm28557A0A087WQQ0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28557A0A087WQQ0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28557A0A087WQQ0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm28557A0A087WQQ0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Gm10420-201ENSMUST00000121713 882 ntBASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Gm12366-201ENSMUST00000121722 873 ntBASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Gm5786-201ENSMUST00000085368 882 ntBASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm28557A0A087WQQ0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
Gm28557A0A087WQQ0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Gm28557A0A087WQQ0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm28557A0A087WQQ0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms