Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gm7332-201ENSMUST00000118351 454 ntBASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Golph3-202ENSMUST00000226517 2359 ntBASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gm4430-201ENSMUST00000192413 1943 ntBASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13-4-dv7A0A075B6C2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.9□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13-4-dv7A0A075B6C2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms