Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.46■□□□□ 0.23
Trav6d-5A0A075B6B9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6d-5A0A075B6B9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trav6d-5A0A075B6B9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav6d-5A0A075B6B9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-5A0A075B6B9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trav6d-5A0A075B6B9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-5A0A075B6B9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav6d-5A0A075B6B9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav6d-5A0A075B6B9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-5A0A075B6B9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-5A0A075B6B9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-5A0A075B6B9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav6d-5A0A075B6B9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav6d-5A0A075B6B9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav6d-5A0A075B6B9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav6d-5A0A075B6B9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav6d-5A0A075B6B9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.41■□□□□ 0.22
Trav6d-5A0A075B6B9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Gm11687-201ENSMUST00000118911 886 ntBASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6d-5A0A075B6B9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6d-5A0A075B6B9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav6d-5A0A075B6B9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trav6d-5A0A075B6B9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-5A0A075B6B9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-5A0A075B6B9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6d-5A0A075B6B9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav6d-5A0A075B6B9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6d-5A0A075B6B9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6d-5A0A075B6B9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms