Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav18A0A075B656 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.64■□□□□ 0.25
Trav18A0A075B656 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.64■□□□□ 0.25
Trav18A0A075B656 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav18A0A075B656 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav18A0A075B656 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav18A0A075B656 Gm13238-201ENSMUST00000117655 780 ntBASIC16.63■□□□□ 0.25
Trav18A0A075B656 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.63■□□□□ 0.25
Trav18A0A075B656 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav18A0A075B656 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav18A0A075B656 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav18A0A075B656 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav18A0A075B656 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.62■□□□□ 0.25
Trav18A0A075B656 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav18A0A075B656 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav18A0A075B656 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav18A0A075B656 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav18A0A075B656 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav18A0A075B656 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.59■□□□□ 0.25
Trav18A0A075B656 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.59■□□□□ 0.25
Trav18A0A075B656 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav18A0A075B656 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav18A0A075B656 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.58■□□□□ 0.25
Trav18A0A075B656 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trav18A0A075B656 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav18A0A075B656 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.58■□□□□ 0.24
Trav18A0A075B656 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav18A0A075B656 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms