Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4-2A0A075B638 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4-2A0A075B638 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4-2A0A075B638 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4-2A0A075B638 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-2A0A075B638 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav4-2A0A075B638 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-2A0A075B638 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-2A0A075B638 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-2A0A075B638 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4-2A0A075B638 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav4-2A0A075B638 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4-2A0A075B638 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4-2A0A075B638 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4-2A0A075B638 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4-2A0A075B638 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-2A0A075B638 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-2A0A075B638 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-2A0A075B638 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-2A0A075B638 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-2A0A075B638 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4-2A0A075B638 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-2A0A075B638 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav4-2A0A075B638 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav4-2A0A075B638 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Trav4-2A0A075B638 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-2A0A075B638 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-2A0A075B638 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4-2A0A075B638 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav4-2A0A075B638 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4-2A0A075B638 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav4-2A0A075B638 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms