Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav4n-4A0A075B615 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav4n-4A0A075B615 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Gm9812-201ENSMUST00000061934 968 ntBASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav4n-4A0A075B615 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav4n-4A0A075B615 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav4n-4A0A075B615 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Trav4n-4A0A075B615 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4n-4A0A075B615 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4n-4A0A075B615 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4n-4A0A075B615 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4n-4A0A075B615 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4n-4A0A075B615 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav4n-4A0A075B615 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav4n-4A0A075B615 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav4n-4A0A075B615 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.06□□□□□ -0.16
Trav4n-4A0A075B615 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.05□□□□□ -0.16
Trav4n-4A0A075B615 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4n-4A0A075B615 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms