Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-54A0A075B5W5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-54A0A075B5W5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-54A0A075B5W5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.16■□□□□ 0.5
Ighv1-54A0A075B5W5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-54A0A075B5W5 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ighv1-54A0A075B5W5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-54A0A075B5W5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-54A0A075B5W5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Gm43530-201ENSMUST00000195920 274 ntBASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-54A0A075B5W5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-54A0A075B5W5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Gm12922-201ENSMUST00000120626 809 ntBASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-54A0A075B5W5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-54A0A075B5W5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-54A0A075B5W5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-54A0A075B5W5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms