Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb2S4R1M3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm7666-201ENSMUST00000146631 819 ntBASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm43852-201ENSMUST00000202098 917 ntBASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm8574-201ENSMUST00000203207 924 ntBASIC11.35□□□□□ -0.59
H2afb2S4R1M3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.35□□□□□ -0.59
H2afb2S4R1M3 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.35□□□□□ -0.59
H2afb2S4R1M3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm25148-201ENSMUST00000104611 123 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm9089-201ENSMUST00000122027 526 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm18367-201ENSMUST00000176139 600 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm42867-201ENSMUST00000202995 469 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm17825-201ENSMUST00000206836 794 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
H2afb2S4R1M3 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.34□□□□□ -0.59
H2afb2S4R1M3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms