Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Gm13809-201ENSMUST00000117921 597 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Gm45770-201ENSMUST00000212105 616 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tubb3Q9ERD7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm29787-201ENSMUST00000222129 849 ntBASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubb3Q9ERD7 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubb3Q9ERD7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms