Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Gm13809-201ENSMUST00000117921 597 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Gm16166-201ENSMUST00000118291 787 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cpne8Q9DC53 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm24891-201ENSMUST00000104391 136 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm8111-201ENSMUST00000117659 987 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Mir6927-201ENSMUST00000184494 71 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm45856-201ENSMUST00000212752 416 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms