Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gm43378-201ENSMUST00000199336 582 ntBASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Gm9555-201ENSMUST00000200908 583 ntBASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf6Q9DBU5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm17831-201ENSMUST00000205579 900 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm5451-201ENSMUST00000080545 579 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf6Q9DBU5 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Gm8111-201ENSMUST00000117659 987 ntBASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Gm15432-201ENSMUST00000121106 195 ntBASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Gm4726-201ENSMUST00000135604 736 ntBASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Gm6019-201ENSMUST00000148369 736 ntBASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Gm23694-201ENSMUST00000179335 110 ntBASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Mir7070-201ENSMUST00000183657 86 ntBASIC12.17□□□□□ -0.46
Rnf6Q9DBU5 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms