Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.78□□□□□ -0.52
Nop56Q9D6Z1 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.77□□□□□ -0.52
Nop56Q9D6Z1 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm14644-201ENSMUST00000116671 647 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm13829-201ENSMUST00000119600 138 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm38158-201ENSMUST00000194617 339 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Gm17872-201ENSMUST00000222550 532 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nop56Q9D6Z1 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Snora78-201ENSMUST00000158630 128 ntBASIC11.76□□□□□ -0.53
Nop56Q9D6Z1 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms