Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm13316-201ENSMUST00000140537 691 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm25261-201ENSMUST00000157416 134 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm25927-201ENSMUST00000175058 117 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm38241-201ENSMUST00000192641 898 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm17794-201ENSMUST00000220252 955 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sf3a3Q9D554 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gm14832-201ENSMUST00000121289 322 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Sf3a3Q9D554 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm2546-201ENSMUST00000182630 991 ntBASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms